Index A | B | C | D | E | F | G | I | J | K | L | M | N | O | P | R | S | T | U | V | W | Y A add() (cedne.FoldPolicySet method) add_citation() (cedne.Citable method) add_context() (cedne.Animal method) add_metadata() (cedne.Trial method) add_neuron() (cedne.NeuronGroup method) add_trial() (cedne.Neuron method) add_variable() (cedne.Behavior method) adjacency() (cedne.NervousSystem method) aggregator (cedne.FoldPolicy attribute) align_to_neural() (cedne.Behavior method) all_paths() (cedne.Neuron method) Animal (class in cedne) apply_policy() (in module cedne) authors (cedne.Citation attribute) B Behavior (class in cedne) build_network() (cedne.NervousSystem method) BulkConnection (class in cedne) by_name (cedne.Connection property) C cedne module Cell (class in cedne) ChemicalSynapse (class in cedne) Citable (class in cedne) Citation (class in cedne) citations_to_dict() (cedne.Citable method) clear() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) clear_active_context() (cedne.Animal method) compute_power_spectrum() (cedne.Trial method) compute_snr() (cedne.Trial method) concatenate() (cedne.Path method) configure_logging() (in module cedne) Connection (class in cedne) ConnectionGroup (class in cedne) connections_between() (cedne.NervousSystem method) connections_have() (cedne.NervousSystem method) connects_to() (cedne.Neuron method) constituent_categories (cedne.Neuron property) constituent_modalities (cedne.Neuron property) constituent_types (cedne.Neuron property) contract_connections() (cedne.NervousSystem method) contract_neurons() (cedne.NervousSystem method) copy() (cedne.NervousSystem method) copy_data_from() (cedne.NervousSystem method) copy_neurons() (cedne.NervousSystem method) create_connections() (cedne.NervousSystem method) create_connections_from() (cedne.NervousSystem method) create_neurons() (cedne.NervousSystem method) create_neurons_from() (cedne.NervousSystem method) D default_aggregator (cedne.FoldPolicySet attribute) delete_connection_group() (cedne.NervousSystem method) delete_neuron_group() (cedne.NervousSystem method) detect_peaks() (cedne.Trial method) difference() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) doi (cedne.Citation attribute) E effective_citations() (cedne.Citable method) export_graph() (cedne.NervousSystem method) extract_feature() (cedne.StimResponse method) F filter_by_function() (cedne.ConnectionGroup method) filter_by_property() (cedne.ConnectionGroup method) filter_by_type() (cedne.ConnectionGroup method) filter_signal() (cedne.Trial method) Fly (class in cedne) fold_network() (cedne.NervousSystem method) FoldPolicy (class in cedne) FoldPolicySet (class in cedne) from_dict() (cedne.Behavior class method) (cedne.Citation class method) (cedne.FoldPolicy class method) (cedne.FoldPolicySet class method) G GapJunction (class in cedne) generate_random_string() (in module cedne) get() (cedne.FoldPolicySet method) get_average_weight() (cedne.Path method) get_connected_neurons() (cedne.Neuron method) get_connection_types() (cedne.Path method) get_connections() (cedne.Neuron method) (cedne.NeuronGroup method) get_context() (cedne.Animal method) get_duration() (cedne.Trial method) get_length() (cedne.Path method) get_max_weight() (cedne.Path method) get_metadata() (cedne.Trial method) get_min_weight() (cedne.Path method) get_neurons() (cedne.Path method) get_neurons_by_property() (cedne.NeuronGroup method) get_neurons_by_type() (cedne.NeuronGroup method) get_property() (cedne.Connection method) (cedne.ConnectionGroup method) (cedne.Neuron method) (cedne.NeuronGroup method) get_quality_metrics() (cedne.Trial method) get_response_characteristics() (cedne.StimResponse method) get_statistics() (cedne.ConnectionGroup method) (cedne.Trial method) get_timestamps() (cedne.Trial method) get_total_weight() (cedne.Path method) get_variable() (cedne.Behavior method) GraphMap (class in cedne) I incoming() (cedne.Neuron method) intersection() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) is_merged (cedne.Neuron property) is_valid() (cedne.Path method) items() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) J join_networks() (cedne.NervousSystem method) K key (cedne.Citation attribute) keys() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) kind (cedne.FoldPolicy attribute) L link_session() (cedne.Behavior method) link_trial() (cedne.Behavior method) load_connection_data() (cedne.NervousSystem method) load_neuron_data() (cedne.NervousSystem method) load_pickle() (in module cedne) load_recording() (cedne.Neuron method) load_worm() (in module cedne) log_processing() (cedne.Trial method) M make_connection_group() (cedne.NervousSystem method) make_neuron_group() (cedne.NervousSystem method) module cedne N n_timepoints (cedne.Behavior property) name (cedne.FoldPolicy attribute) NervousSystem (class in cedne) Neuron (class in cedne) NeuronGroup (class in cedne) neurons_have() (cedne.NervousSystem method) normalize_signal() (cedne.Trial method) notes (cedne.Citation attribute) num_groups (cedne.NervousSystem property) O outgoing() (cedne.Neuron method) P Path (class in cedne) paths_to() (cedne.Neuron method) policies (cedne.FoldPolicySet attribute) pop() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) (cedne.Path method) R reassign_connections() (cedne.NervousSystem method) recording (cedne.Trial property) remove_all_connections() (cedne.NervousSystem method) remove_citation() (cedne.Citable method) remove_connections() (cedne.NervousSystem method) remove_context() (cedne.Animal method) remove_neuron() (cedne.NeuronGroup method) remove_neurons() (cedne.NervousSystem method) remove_trial() (cedne.Neuron method) remove_unconnected_neurons() (cedne.NervousSystem method) return_network_where() (cedne.NervousSystem method) reverse() (cedne.Path method) S save() (cedne.Animal method) search_motifs() (cedne.NervousSystem method) segment_signal() (cedne.Trial method) serialize_citations() (in module cedne) set_active_context() (cedne.Animal method) set_property() (cedne.Animal method) (cedne.Connection method) (cedne.ConnectionGroup method) (cedne.NervousSystem method) (cedne.Neuron method) (cedne.NeuronGroup method) setup_chemical_connections() (cedne.NervousSystem method) setup_connections() (cedne.NervousSystem method) setup_gap_junctions() (cedne.NervousSystem method) shortest_path() (cedne.NervousSystem method) shortest_paths() (cedne.NervousSystem method) smooth_signal() (cedne.Trial method) StimResponse (class in cedne) subgraph_view() (cedne.NervousSystem method) subnetwork() (cedne.NervousSystem method) T title (cedne.Citation attribute) to_dict() (cedne.Behavior method) (cedne.Citation method) (cedne.Connection method) (cedne.FoldPolicy method) (cedne.FoldPolicySet method) (cedne.NervousSystem method) (cedne.Neuron method) Trial (class in cedne) U union() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) update() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) (cedne.Path method) update_connections() (cedne.NervousSystem method) (cedne.Neuron method) update_network() (cedne.NervousSystem method) update_neurons() (cedne.NervousSystem method) update_weight() (cedne.Connection method) update_weights() (cedne.ConnectionGroup method) update_weights_by_function() (cedne.ConnectionGroup method) url (cedne.Citation attribute) V validate_data() (cedne.Trial method) values() (cedne.ConnectionGroup method) (cedne.NeuronGroup method) variable_names (cedne.Behavior property) W Worm (class in cedne) Y year (cedne.Citation attribute)